.. Au-repos, Caractérisation fonctionnelle des systèmes cortico-souscorticaux en IRMf, p.140

S. Du, 2 Propriétés petit-monde au sein des circuits fonctionnels cortico-sous-corticaux chez les témoins et chez les patients atteints, p.149

. Malherbe, Anatomical consistency of functional segregation in subcortical structures, Proceedings of the 17th International Conference on Functional Mapping of the Human Brain, 2011.

. Malherbe, Small-world architecture of cortico-basal ganglia circuits in Gilles de la Tourette syndrome, Proceedings of the 17th International Conference on Functional Mapping of the Human Brain, 2011.

. Marrakchi-kacem, Probabilistic atlas of the connections between the basal ganglia and the cortex, Proceedings of the ISMRM 18th Annual Scientic Meeting and Exhibition, 2010.
URL : https://hal.archives-ouvertes.fr/inria-00538303

A. Messé, C. Delmaire, Y. Worbe, . Marrelec, C. Valabrègue et al., Connectivity-based delineation of basal ganglia using hierarchical classication, Proceedings of the 16th International Conference on Functional Mapping of the Human Brain Group-ICA model order highlights patterns of functional brain connectivity. Frontiers in Systems Neuroscience, p.37, 2010.

&. Achard, . Bullmore, E. Achard, and . Bullmore, Efficiency and Cost of Economical Brain Functional Networks, PLoS Computational Biology, vol.15, issue.2, p.17, 2007.
DOI : 10.1371/journal.pcbi.0030017.sg002

. Achard, A Resilient, Low-Frequency, Small-World Human Brain Functional Network with Highly Connected Association Cortical Hubs, Journal of Neuroscience, vol.26, issue.1, p.6372, 2006.
DOI : 10.1523/JNEUROSCI.3874-05.2006

. Andersen, Principal component analysis of the dynamic response measured by fMRI: a generalized linear systems framework, Magnetic Resonance Imaging, vol.17, issue.6, pp.795-815, 1999.
DOI : 10.1016/S0730-725X(99)00028-4

. Ashburner, A fast dieomorphic image registration algorithm, Neuroimage, vol.38, p.95113, 2007.

. Bandettini, What's New in Neuroimaging Methods?, Annals of the New York Academy of Sciences, vol.40, issue.1, p.36093, 2009.
DOI : 10.1111/j.1749-6632.2009.04420.x

. Basser, MR diusion tensor spectroscopy and imaging, Biophysical Journal, vol.66, p.25967, 1994.

. Bellec, Identication of large-scale networks in the brain using fMRI, Neuroimage, vol.29, p.123143, 2006.

&. Benjamini and . Hochberg, Benjamini et Y Hochberg Controlling the false discovery rate : a practical and powerful approach to multiple testing, Journal of the Royal Statistical Society, Series B, Statistical Methodology, vol.57, p.289300, 1995.

. Biswal, Functional connectivity in the motor cortex of resting human brain using echo-planar mri, Magnetic Resonance in Medicine, vol.13, issue.4, p.53741, 1995.
DOI : 10.1002/mrm.1910340409

. Biswal, Simultaneous assessment of ow and BOLD signals in resting-state functional connectivity maps, Nuclear Magnetic Resonance in Biomedicine, vol.10, p.16570, 1997.

. Biswal, Abnormal cerebral activation associated with a motor task in Tourette syndrome, American Journal of Neuroradiology, vol.19, p.150912, 1998.

B. Biswal, X. Mennes, . Zuo, . Gohel, S. Kelly et al., Toward discovery science of human brain function, Proceedings of the National Academy of Sciences of the U.S.A, p.47349, 2010.
DOI : 10.1073/pnas.0911855107

. Bloch, Adulthood Outcome of Tic and Obsessive-Compulsive Symptom Severity in Children With Tourette Syndrome, Archives of Pediatrics & Adolescent Medicine, vol.160, issue.1, p.659, 2006.
DOI : 10.1001/archpedi.160.1.65

. Booth, The role of the basal ganglia and cerebellum in language processing, Brain Research, vol.1133, p.13644, 2007.
DOI : 10.1016/j.brainres.2006.11.074

D. Cole, S. Smith, and . Beckmann, Advances and pitfalls in the analysis and interpretation of resting-state FMRI data, Frontiers in Systems Neuroscience, vol.4, p.115, 2010.
DOI : 10.3389/fnsys.2010.00008

R. Nandy, Independent component analysis in the presence of noise in fMRI, Magnetic Resonance Imaging, vol.25, p.123748, 2007.

. Crinion, Spatial normalization of lesioned brains: Performance evaluation and impact on fMRI analyses, NeuroImage, vol.37, issue.3, p.86675, 2007.
DOI : 10.1016/j.neuroimage.2007.04.065

]. Damoiseaux and M. Greicius, Greater than the sum of its parts: a review of studies combining structural connectivity and resting-state functional connectivity, Brain Structure and Function, vol.68, issue.1, p.52533, 2009.
DOI : 10.1007/s00429-009-0208-6

. Damoiseaux, Consistent resting-state networks across healthy subjects, Proceedings of the National Academy of Sciences of the U.S.A, p.1384853, 2006.
DOI : 10.1073/pnas.0601417103

URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1564249

. Damoiseaux, Reduced restingstate brain activity in the default network in normal aging, Cerebral Cortex, vol.18, p.185664, 2008.

I. Daubechies, . Roussos, . Takerkart, . Benharrosh, K. Golden et al., Independent component analysis for brain fMRI does not select for independence, fMRI resting state networks dene distinct modes of long-distance interactions in the human brain, pp.1041522-135967, 2006.
DOI : 10.1073/pnas.0903525106

. Deco, Emerging concepts for the dynamical organization of resting-state activity in the brain, Nature Reviews Neuroscience, vol.4, issue.1, p.4356, 2011.
DOI : 10.1038/nrn2961

]. Delong, Primate models of movement disorders of basal ganglia origin, Trends in Neurosciences, vol.13, issue.7, p.2815, 1990.
DOI : 10.1016/0166-2236(90)90110-V

. Descoteaux, High angular resolution diusion MRI : from local estimation to segmentation and tractography, Thèse de Doctorat en Sciences, 2008.

. Deshpande, Instantaneous and causal connectivity in resting state brain networks derived from functional MRI data, NeuroImage, vol.54, issue.2, p.104352, 2011.
DOI : 10.1016/j.neuroimage.2010.09.024

]. Dice, Measures of the Amount of Ecologic Association Between Species, Ecology, vol.26, issue.3, p.297302, 1945.
DOI : 10.2307/1932409

. Draganski, Evidence for Segregated and Integrative Connectivity Patterns in the Human Basal Ganglia, Journal of Neuroscience, vol.28, issue.28, p.714352, 2008.
DOI : 10.1523/JNEUROSCI.1486-08.2008

. Drake, Cassette EEG Sleep Recordings in Gilles de la Tourette Syndrome, Clinical EEG and Neuroscience, vol.23, issue.3, p.1426, 1992.
DOI : 10.1177/155005949202300309

&. Draper, N. Smith, . Draper, and . Smith, Applied regression analysis, 1998.
DOI : 10.1002/9781118625590

]. Dum and P. Strick, Motor areas in the frontal lobe of the primate, Physiology & Behavior, vol.77, issue.4-5, p.67782, 2002.
DOI : 10.1016/S0031-9384(02)00929-0

&. Efron, . Tibshirani, R. Efron, and . Tibshirani, An Introduction to the Bootstrap, 1993.
DOI : 10.1007/978-1-4899-4541-9

. Evans, An MRI-based stereotactic atlas from 250 young normal subjects, Journal of Society Neuroscience Abstract, vol.18, p.408, 1992.

]. Evans, The postconcussion syndrome and the sequelae of mild head injury, Clinical Neurology, vol.10, p.81547, 1992.

. Fair, Development of distinct control networks through segregation and integration, Proceedings of the National Academy of Sciences of the U.S.A, p.1350712, 2007.
DOI : 10.1073/pnas.0705843104

D. Fair, J. Cohen, . Power, J. Dosenbach, F. Church et al., Functional Brain Networks Develop from a ???Local to Distributed??? Organization, PLoS Computational Biology, vol.57, issue.5, 2009.
DOI : 10.1371/journal.pcbi.1000381.s009

. Ferry, Prefrontal cortical projections to the striatum in macaque monkeys: Evidence for an organization related to prefrontal networks, The Journal of Comparative Neurology, vol.312, issue.3, p.44770, 2000.
DOI : 10.1002/1096-9861(20000925)425:3<447::AID-CNE9>3.0.CO;2-V

. Filippini, Distinct patterns of brain activity in young carriers of the APOE-?4 allele, Proceedings of the National Academy of Sciences of the U.S.A, p.720914, 2009.

A. Fischl, C. Van-der-kouwe, . Destrieux, . Halgren, D. Segonne et al., Automatically Parcellating the Human Cerebral Cortex, Cerebral Cortex, vol.14, issue.1, p.1122, 2004.
DOI : 10.1093/cercor/bhg087

. Flechsig, Le cerveau et l'âme. Sur les centres d'association du cerveau humain. La localisation des processus psychiques, surtout des sensations de l'homme. L'année psychologique, p.3458, 1896.

. Forstmann, Individual differences in cortico-striatal connections predict control over speed and accuracy in perceptual decision making, Proceedings of the National Academy of Sciences of the U.S.A, p.1591620, 2010.
DOI : 10.1016/j.neures.2010.07.428

]. Fox and M. Raichle, Spontaneous uctuations in brain activity observed with functional magnetic resonance imaging, Nature Reviews Neuroscience, vol.8, p.70011, 2007.

. Fox, Nonoxidative glucose consumption during focal physiologic neural activity The human brain is intrinsically organized into dynamic, anticorrelated functional networks, Proceedings of the National Academy of Sciences of the U.S.A, pp.4624-96738, 1988.

D. François, . Grabli, C. Mccairn, . Jan, E. Karachi et al., Behavioural disorders induced by external globus pallidus dysfunction in primates II. Anatomical study, Brain, vol.127, issue.9, p.205570, 2004.
DOI : 10.1093/brain/awh239

. Friston, Functional Connectivity: The Principal-Component Analysis of Large (PET) Data Sets, Journal of Cerebral Blood Flow & Metabolism, vol.10, issue.1, 1993.
DOI : 10.1038/jcbfm.1993.4

]. Friston, Functional and eective connectivity in neuroimaging : a synthesis, Human Brain Mapping, vol.2, p.5678, 1994.

]. Friston, The disconnection hypothesis, Schizophrenia Research, vol.30, issue.2, p.11525, 1998.
DOI : 10.1016/S0920-9964(97)00140-0

L. He, . Concha, . Lebel, . Gross, C. Evans et al., Mapping anatomical connectivity patterns of human cerebral cortex using in vivo diusion tensor imaging tractography, Cerebral Cortex, vol.19, p.52436, 2009.

. Goodman, The Yale-Brown Obsessive Compulsive Scale, II. Validity. Archives of General Psychiatry, vol.46, p.10126, 1989.

. Gosseries, Que mesure la neuro-imagerie fonctionnelle : IRMf, p.2317, 2008.

. Govindan, Abnormal water diusivity in corticostriatal projections in children with Tourette syndrome, Human Brain Mapping, vol.31, p.166574, 2010.

. Grabli, Behavioural disorders induced by external globus pallidus dysfunction in primates: I. Behavioural study, Brain, vol.127, issue.9, pp.2039-54, 2004.
DOI : 10.1093/brain/awh220

M. Greicius, A. Krasnow, V. Reiss, and . Menon, Functional connectivity in the resting brain: A network analysis of the default mode hypothesis, Proceedings of the National Academy of Sciences of the U.S.A, p.2538, 2003.
DOI : 10.1073/pnas.0135058100

M. Greicius, V. Supekar, R. Menon, and . Dougherty, Resting-state functional connectivity reects structural connectivity in the default mode network, Cerebral Cortex, vol.19, p.728, 2009.

L. Guimerà and . Amaral, Cartography of complex networks: modules and universal roles, Journal of Statistical Mechanics: Theory and Experiment, vol.2005, issue.02, p.2001, 2005.
DOI : 10.1088/1742-5468/2005/02/P02001

N. Habas, . Kamdar, . Nguyen, C. Prater, . Beckmann et al., Distinct cerebellar contributions to intrinsic connectivity networks, The Journal of Neuroscience, vol.29, p.858694, 2009.

&. Haber, ]. Lu, . Haber, and . Lu, Distribution of preproenkephalin messenger RNA in the basal ganglia and limbic-associated regions of the monkey telencephalon, Neuroscience, vol.65, issue.2, p.41729, 1995.
DOI : 10.1016/0306-4522(94)00490-V

]. Haber, The primate basal ganglia: parallel and integrative networks, Journal of Chemical Neuroanatomy, vol.26, issue.4, p.31730, 2003.
DOI : 10.1016/j.jchemneu.2003.10.003

. Hagmann, Mapping Human Whole-Brain Structural Networks with Diffusion MRI, PLoS ONE, vol.247, issue.60, p.597, 2007.
DOI : 10.1371/journal.pone.0000597.s007

. Hampson, Detection of functional connectivity using temporal correlations in MR images, Human Brain Mapping, vol.8, issue.4, p.24762, 2002.
DOI : 10.1002/hbm.10022

]. Hebb, The organization of behavior : A neuropsychological theory, 1949.

. Hikosaka, Role of the basal ganglia in the control of purposive saccadic eye movements, Physiological Reviews, vol.80, p.95378, 2000.

]. Honey, . Sporns, . Cammoun, J. Gigandet, R. Thiran et al., Predicting human resting-state functional connectivity from structural connectivity, Proceedings of the National Academy of Sciences of the U.S.A, p.203540, 2009.
DOI : 10.1073/pnas.0811168106

&. Humphries, ]. Gurney, K. Humphries, and . Gurney, Network 'small-worldness' : a quantitative method for determining canonical network equivalence, 2008.

. Hyde, Cerebral morphometric abnormalities in Tourette's syndrome: A quantitative MRI study of monozygotic twins, Neurology, vol.45, issue.6, p.117682, 1995.
DOI : 10.1212/WNL.45.6.1176

. Iturria-medina, Characterizing brain anatomical connections using diffusion weighted MRI and graph theory, NeuroImage, vol.36, issue.3, p.64560, 2007.
DOI : 10.1016/j.neuroimage.2007.02.012

. Iturria-medina, Studying the human brain anatomical network via diusion-weighted MRI and Graph Theory, Neuroimage, vol.40, p.106476, 2008.

S. Jenkinson and . Smith, A global optimisation method for robust ane registration of brain images, Medical Image Analysis, vol.5, p.14356, 2001.

. Kahle, Atlas de poche d'anatomie, 2002.

&. Kaiser, . Hilgetag, C. Kaiser, and . Hilgetag, Nonoptimal Component Placement, but Short Processing Paths, due to Long-Distance Projections in Neural Systems, PLoS Computational Biology, vol.21, issue.7, p.95, 2006.
DOI : 10.1371/journal.pcbi.0020095.sg003

. Kalanithi, Altered parvalbumin-positive neuron distribution in basal ganglia of individuals with Tourette syndrome, Proceedings of the National Academy of Sciences of the U.S.A, p.1330712, 2005.
DOI : 10.1073/pnas.0502624102

. Karachi, Three-dimensional cartography of functional territories in the human striatopallidal complex by using calbindin immunoreactivity, Journal of Comparative Neurology, vol.332, issue.2, p.12234, 2002.
DOI : 10.1002/cne.10312

URL : https://hal.archives-ouvertes.fr/inria-00615628

P. Kataoka, . Kalanithi, M. Grantz, C. Schwartz, J. Saper et al., Decreased number of parvalbumin and cholinergic interneurons in the striatum of individuals with Tourette syndrome, The Journal of Comparative Neurology, vol.255, issue.3, p.27791, 2010.
DOI : 10.1002/cne.22206

. Kiviniemi, Independent component analysis of nondeterministic fMRI signal sources, NeuroImage, vol.19, issue.2, p.25360, 2003.
DOI : 10.1016/S1053-8119(03)00097-1

. Kiviniemi, Functional segmentation of the brain cortex using high model order group PICA, Human Brain Mapping, vol.30, p.386586, 2009.

. Koch, An Investigation of Functional and Anatomical Connectivity Using Magnetic Resonance Imaging, NeuroImage, vol.16, issue.1, 2002.
DOI : 10.1006/nimg.2001.1052

. Krack, Deep brain stimulation : from neurology to psychiatry ? The functional neuroanatomy of the human orbitofrontal cortex : evidence from neuroimaging and neuropsychology, Trends in Neurosciences Progress in Neurobiology, vol.33, issue.72, pp.47484-34172, 2004.

&. Kunishio, . Haber, S. Kunishio, and . Haber, Primate cingulostriatal projection: Limbic striatal versus sensorimotor striatal input, The Journal of Comparative Neurology, vol.14, issue.3, p.33756, 1994.
DOI : 10.1002/cne.903500302

. Laird, Behavioral Interpretations of Intrinsic Connectivity Networks, Journal of Cognitive Neuroscience, vol.31, issue.12, p.402237, 2011.
DOI : 10.1016/j.neuroimage.2009.10.080

&. Latora, M. Latora, and . Marchiori, Ecient behavior of smallworld networks, Physical Review Letters, vol.87, p.1987014, 2001.

. Leckman, The Yale Global Tic Severity Scale: Initial Testing of a Clinician-Rated Scale of Tic Severity, Journal of the American Academy of Child & Adolescent Psychiatry, vol.28, issue.4, p.56673, 1989.
DOI : 10.1097/00004583-198907000-00015

. Leh, Frontostriatal connections in the human brain : a probabilistic diusion tractography study, Neuroscience Letters, vol.419, p.1138, 2007.

. Lehéricy, Diusion tensor ber tracking shows distinct corticostriatal circuits in humans, Annals of Neurology, vol.55, p.5229, 2004.

. Lehéricy, Motor control in basal ganglia circuits using fMRI and brain atlas approaches, Cerebral Cortex, vol.16, issue.2, p.14961, 2006.
DOI : 10.1093/cercor/bhi089

. Lehéricy, 3-D diusion tensor axonal tracking shows distinct SMA and pre-SMA projections to the human striatum, Cerebral Cortex, vol.14, p.13029, 2004.

. Lévesque and . Parent, The striatofugal ber system in primates : a reevaluation of its organization based on single-axon tracing Références bibliographiques 219, 2005.

. Logothetis, Neurophysiological investigation of the basis of the fMRI signal, 2001.

. Ludolph, Are amygdalar volume alterations in children with Tourette syndrome due to ADHD comorbidity?, Developmental Medicine & Child Neurology, vol.65, issue.Pt 2, p.5249, 2008.
DOI : 10.1111/j.1469-8749.2008.03014.x

. Luo, Resting state basal ganglia network in idiopathic generalized epilepsy, Human Brain Mapping, vol.458, issue.Suppl 1, 2011.
DOI : 10.1002/hbm.21286

. Makeig, Blind separation of auditory event-related brain responses into independent components, Proceedings of the National Academy of Sciences of the U.S.A, p.1097984, 1997.
DOI : 10.1073/pnas.94.20.10979

. Makki, Microstructural abnormalities of striatum and thalamus in children with Tourette syndrome, Movement Disorders, vol.20, issue.16, p.234956, 2008.
DOI : 10.1002/mds.22264

. Malherbe, Identication of functional cortico-subcortical networks in resting-state fMRI : a combined NEDICA and GLM analysis, Proceedings of the 2010 IEEE International Symposium on Biomedical Imaging : From Nano to Macro (ISBI'10), p.116972, 2010.

. Mallet, Stimulation of subterritories of the subthalamic nucleus reveals its role in the integration of the emotional and motor aspects of behavior, Proceedings of the National Academy of Sciences of the U.S.A, p.106616, 2007.
DOI : 10.1073/pnas.0610849104

. Mangin, Object-based Références bibliographiques morphometry of the cerebral cortex, IEEE Transactions on Medical Imaging, vol.23, p.96882, 2004.

. Margulies, Precuneus shares intrinsic functional architecture in humans and monkeys, Proceedings of the National Academy of Sciences of the U.S.A, 2009.
DOI : 10.1073/pnas.0905314106

. Marrakchi-kacem-2011-]-l-marrakchi-kacem, Connectivité anatomique des noyaux gris centraux : développements méthodologiques et application aux troubles moteurs, Thèse de Doctorat en Sciences, 2011.

. Marrelec, Partial correlation for functional brain interactivity investigation in functional MRI, NeuroImage, vol.32, issue.1, p.22837, 2006.
DOI : 10.1016/j.neuroimage.2005.12.057

URL : https://hal.archives-ouvertes.fr/inserm-00163740

. Marrelec, Regions, systems, and the brain: Hierarchical measures of functional integration in fMRI, Medical Image Analysis, vol.12, issue.4, p.48496, 2008.
DOI : 10.1016/j.media.2008.02.002

URL : https://hal.archives-ouvertes.fr/inserm-00536662

. Mcintosh, Network analysis of cortical visual pathways mapped with PET, The Journal of Neuroscience, vol.14, p.65566, 1994.

. Mckeown, Analysis of fMRI data by blind separation into independent spatial components, Human Brain Mapping, vol.6, p.16088, 1998.

. Messé, Caractérisation de la relation structure-fonction dans le cerveau humain à partir de données d'IRM fonctionnelle et de diusion, Méthodes et applications cognitive et clinique, Thèse de Doctorat en Sciences, 2010.

]. Mesulam, From sensation to cognition, Brain, vol.121, issue.6, p.101352, 1998.
DOI : 10.1093/brain/121.6.1013

. Meunier, Age-related changes in modular organization of human brain functional networks, NeuroImage, vol.44, issue.3, p.71523, 2009.
DOI : 10.1016/j.neuroimage.2008.09.062

URL : https://hal.archives-ouvertes.fr/hal-00350197

]. Middleton and P. Strick, Basal Ganglia Output and Cognition: Evidence from Anatomical, Behavioral, and Clinical Studies, Brain and Cognition, vol.42, issue.2, p.183200, 2000.
DOI : 10.1006/brcg.1999.1099

URL : http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.322.734

J. Mink, THE BASAL GANGLIA: FOCUSED SELECTION AND INHIBITION OF COMPETING MOTOR PROGRAMS, Progress in Neurobiology, vol.50, issue.4, p.381425, 1996.
DOI : 10.1016/S0301-0082(96)00042-1

]. Mink, The Basal Ganglia and Involuntary Movements, Archives of Neurology, vol.60, issue.10, p.13658, 2003.
DOI : 10.1001/archneur.60.10.1365

. Mori, Three-dimensional tracking of axonal projections in the brain by magnetic resonance imaging, Annals of Neurology, vol.40, issue.2, p.2659, 1999.
DOI : 10.1002/1531-8249(199902)45:2<265::AID-ANA21>3.0.CO;2-3

. Murphy, The impact of global signal regression on resting state correlations: Are anti-correlated networks introduced?, NeuroImage, vol.44, issue.3, p.893905, 2009.
DOI : 10.1016/j.neuroimage.2008.09.036

. Nambu, Functional signicance of the cortico-subthalamo-pallidal 'hyperdirect' pathway, Neuroscience Research, vol.43, p.1117, 2002.

. Neuner, White-matter abnormalities in Tourette syndrome extend beyond motor pathways, NeuroImage, vol.51, issue.3, p.118493, 2010.
DOI : 10.1016/j.neuroimage.2010.02.049

]. Newman, Assortative Mixing in Networks, Physical Review Letters, vol.89, issue.20, p.20870114, 2002.
DOI : 10.1103/PhysRevLett.89.208701

]. Newman, Fast algorithm for detecting community structure in networks, Physical review. E, Statistical, nonlinear, and soft matter physics, p.66133, 2004.
DOI : 10.1103/PhysRevE.69.066133

. Ogawa, Brain magnetic resonance imaging with contrast dependent on blood oxygenation., Proceedings of the National Academy of Sciences of the U.S.A, p.986872, 1990.
DOI : 10.1073/pnas.87.24.9868

&. Pandya, E. Pandya, and . Yeterian, Chapter 4 Prefrontal cortex in relation to other cortical areas in rhesus monkey: Architecture and connections, Progress in Brain Research, vol.85, p.6394, 1990.
DOI : 10.1016/S0079-6123(08)62676-X

]. Papez, A PROPOSED MECHANISM OF EMOTION, Archives of Neurology And Psychiatry, vol.38, issue.4, p.10312, 1995.
DOI : 10.1001/archneurpsyc.1937.02260220069003

A. Parent and L. Hazrati, Functional anatomy of the basal Références bibliographiques ganglia. I. The cortico-basal ganglia-thalamo-cortical loop, Brain research reviews, vol.20, p.91127, 1995.

. Patenaude, A Bayesian model of shape and appearance for subcortical brain segmentation, NeuroImage, vol.56, issue.3, 2011.
DOI : 10.1016/j.neuroimage.2011.02.046

W. Peneld and T. Rasmussen, The Cerebral Cortex of Man : a Clinical Study of Localisation of Function, 1950.

. Perlbarg, CORSICA: correction of structured noise in fMRI by automatic identification of ICA components, Magnetic Resonance Imaging, vol.25, issue.1, p.3546, 2007.
DOI : 10.1016/j.mri.2006.09.042

URL : https://hal.archives-ouvertes.fr/inserm-00131137

. Perlbarg, NEDICA: Detection of group functional networks in FMRI using spatial independent component analysis, 2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, p.124750, 2008.
DOI : 10.1109/ISBI.2008.4541229

. Peterson, A Functional Magnetic Resonance Imaging Study of Tic Suppression in Tourette Syndrome, Archives of General Psychiatry, vol.55, issue.4, p.32633, 1998.
DOI : 10.1001/archpsyc.55.4.326

. Peterson, Regional Brain and Ventricular Volumes in Tourette Syndrome, Archives of General Psychiatry, vol.58, issue.5, p.42740, 2001.
DOI : 10.1001/archpsyc.58.5.427

. Peterson, Basal Ganglia Volumes in Patients With Gilles de la Tourette Syndrome, Archives of General Psychiatry, vol.60, issue.4, p.41524, 2003.
DOI : 10.1001/archpsyc.60.4.415

. Poupon, Détection des faisceaux de bres de la substance blanche pour l'étude de la connectivité anatomique cérébrale, Thèse de Doctorat en Sciences, Ecole Nationale Supérieure des Télécommunications, 1999.

. Power, The Development of Human Functional Brain Networks, Neuron, vol.67, issue.5, p.73548, 2010.
DOI : 10.1016/j.neuron.2010.08.017

. Power, Spurious but systematic correlations in functional connectivity MRI networks arise from subject motion, NeuroImage, vol.59, issue.3, 2011.
DOI : 10.1016/j.neuroimage.2011.10.018

. Raichle, A default mode of brain function, Proceedings of the National Academy of Sciences of the U.S.A, p.67682, 2001.
DOI : 10.1073/pnas.98.2.676

. Riddle, SPECT imaging of cerebral blood ow in Tourette syndrome, Advances in Neurology, vol.58, p.20711, 1992.

&. Robertson, M. Baron-cohen, S. Robertson, and . Baron-cohen, Tourette syndrome : The facts, 1998.

]. Robertson, Tourette syndrome, associated conditions and the complexities of treatment, Brain, vol.123, issue.3, p.42562, 2000.
DOI : 10.1093/brain/123.3.425

. Robinson, A resting state network in the motor control circuit of the basal ganglia, BMC Neuroscience, vol.10, issue.1, p.137, 2009.
DOI : 10.1186/1471-2202-10-137

O. Rubinov and . Sporns, Complex network measures of brain connectivity: Uses and interpretations, NeuroImage, vol.52, issue.3, p.105969, 2010.
DOI : 10.1016/j.neuroimage.2009.10.003

. Salvador, Neurophysiological Architecture of Functional Magnetic Resonance Images of Human Brain, Cerebral Cortex, vol.15, issue.9, p.133242, 2005.
DOI : 10.1093/cercor/bhi016

. Seeley, Dissociable intrinsic connectivity Références bibliographiques networks for salience processing and executive control, The Journal of Neuroscience, vol.27, p.234956, 2007.

&. Selemon, J. Goldman-rakic, P. Selemon, M. Goldman-rakic, . Sharman et al., Longitudinal topography and interdigitation of corticostriatal projections in the rhesus monkey Parkinson's disease patients show reduced anatomical and functional connectivity in corticalsubcortical motor circuits, Proceedings of the 17th Annual Meeting of the Organization for Human Brain Mapping, p.77694, 1985.

. Shehzad, The Resting Brain: Unconstrained yet Reliable, Cerebral Cortex, vol.19, issue.10, p.220929, 2009.
DOI : 10.1093/cercor/bhn256

&. Singh, ]. Fawcett, I. Singh, and . Fawcett, Transient and linearly graded deactivation of the human default-mode network by a visual detection task, NeuroImage, vol.41, issue.1, 2008.
DOI : 10.1016/j.neuroimage.2008.01.051

. Smith, Microcircuitry of the direct and indirect pathways of the basal ganglia, Neuroscience, vol.86, p.35387, 1998.

S. Smith, M. Jenkinson, C. Woolrich, . Beckmann, H. Behrens et al., Advances in functional and structural MR image analysis and implementation as FSL, NeuroImage, vol.23, p.20819, 2004.
DOI : 10.1016/j.neuroimage.2004.07.051

S. Smith, . Fox, D. Miller, P. Glahn, C. Fox et al., Correspondence of the brain's functional architecture during activation and rest, Proceedings of the National Academy of Sciences of the U.S.A, p.130405, 2009.
DOI : 10.1073/pnas.0905267106

]. Smith, Fast robust automated brain extraction, Human Brain Mapping, vol.20, issue.3, p.14355, 2002.
DOI : 10.1002/hbm.10062

. Sowell, Thinning of sensorimotor cortices in children with Tourette syndrome A measure for brain complexity : relating functional segregation and integration in the nervous system, Proceedings of the National Academy of Sciences of the U.S.A, pp.6379-50337, 1994.

. Tzourio-mazoyer, Automated Anatomical Labeling of Activations in SPM Using a Macroscopic Anatomical Parcellation of the MNI MRI Single-Subject Brain, NeuroImage, vol.15, issue.1, p.27389, 2002.
DOI : 10.1006/nimg.2001.0978

. Ugolini, Transneuronal transfer of herpes virus from peripheral nerves to cortex and brainstem, Science, vol.243, issue.4887, p.8991, 1989.
DOI : 10.1126/science.2536188

V. Van-de-ven, . Formisano, C. Prvulovic, D. Roeder, and . Linden, Functional connectivity as revealed by spatial independent component analysis of fMRI measurements during rest, Human Brain Mapping, vol.8, issue.3, p.16578, 2004.
DOI : 10.1002/hbm.20022

M. Van-den-heuvel and H. Pol, Exploring the brain network: A review on resting-state fMRI functional connectivity, European Neuropsychopharmacology, vol.20, issue.8, p.51934, 2010.
DOI : 10.1016/j.euroneuro.2010.03.008

M. Van-den-heuvel, C. J. Stam, H. Boersma, and . Pol, Small-world and scale-free organization of voxel-based restingstate functional connectivity in the human brain, Neuroimage, vol.43, p.52839, 2008.

. Van, Functionally linked resting-state networks reect the underlying structural connectivity architecture of the human brain, Human Brain Mapping, vol.30, p.312741, 2009.

. Van-dijk, Intrinsic Functional Connectivity As a Tool For Human Connectomics: Theory, Properties, and Optimization, Journal of Neurophysiology, vol.103, issue.1, p.297321, 2010.
DOI : 10.1152/jn.00783.2009

. Varela, The brainweb : Phase synchronization and large-scale integration, Nature Review Neuroscience, vol.2, p.22939, 2001.

S. Varoquaux, . Sadaghiani, . Pinel, J. Kleinschmidt, . Poline et al., A group model for stable multi-subject ICA on fMRI datasets, NeuroImage, vol.51, issue.1, p.28899, 2010.
DOI : 10.1016/j.neuroimage.2010.02.010

URL : https://hal.archives-ouvertes.fr/hal-00489507

D. Watts and S. Strogatz, Collective dynamics of 'smallworld' networks, Nature, vol.393, p.4402, 1998.

. Werner, Altered amygdala functional connectivity in adult Tourette???s syndrome, European Archives of Psychiatry and Clinical Neuroscience, vol.26, issue.S2, p.959, 2010.
DOI : 10.1007/s00406-010-0161-7

. Whitwell, Disrupted thalamocortical connectivity in PSP: A resting-state fMRI, DTI, and VBM study, Parkinsonism & Related Disorders, vol.17, issue.8, p.599605, 2011.
DOI : 10.1016/j.parkreldis.2011.05.013

. Worsley, A general statistical analysis for fMRI data, Neuroimage, vol.15, p.115, 2002.

. Worsley, Comparing functional connectivity via thresholding correlations and singular value de- composition, 2005.
DOI : 10.1098/rstb.2005.1637

URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1854921

. Yelnik, Morphological taxonomy of the neurons of the primate striatum, Journal of Comparative Neurology, vol.4, issue.2, p.27394, 1991.
DOI : 10.1002/cne.903130207

. Yelnik, A three-dimensional, histological and deformable atlas of the human basal ganglia. I. Atlas construction based on immunohistochemical and MRI data, NeuroImage, vol.34, issue.2, p.61838, 2007.
DOI : 10.1016/j.neuroimage.2006.09.026

URL : https://hal.archives-ouvertes.fr/inria-00616029